Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004574 Human Papillomavirus HPV16 NC_001526.2
 4564 4593 hg19 7 7641295 7641326 p21.3 RPA3, UMAD1, ENSG00000283549 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004578 Human Papillomavirus HPV16 NC_001526.2
 5437 5464 hg19 7 7589190 7589273 p21.3 MIOS, ENSG00000293795 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004579 Human Papillomavirus HPV16 NC_001526.2
 5441 5464 hg19 7 7589190 7589215 p21.3 MIOS, ENSG00000293795 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004581 Human Papillomavirus HPV16 NC_001526.2
 5597 5621 hg19 7 63523951 63523977 q11.21 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS10019931 Hepatitis B virus - NC_003977.1
 - - hg19 7 35071408 35071699 p14.2 ENSG00000287249 Tumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS30003953 Human Immunodeficiency Virus - Not given - - hg19 7 826574 826574 p22.3 SUN1 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003954 Human Immunodeficiency Virus - Not given - - hg19 7 1136654 1136654 p22.3 C7orf50 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003955 Human Immunodeficiency Virus - Not given - - hg19 7 2408546 2408546 p22.3 CHST12 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003956 Human Immunodeficiency Virus - Not given - - hg19 7 2563443 2563443 p22.3 IQCE Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003957 Human Immunodeficiency Virus - Not given - - hg19 7 2800329 2800329 p22.2 GNA12 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0