Search Results
| No. | VISDB ID | Virus Name | Subtype | Virus Genome | Breakpoint 1 | Breakpoint 2 | Human Genome | Chr | Start | End | Loci | Target Gene | Sample Type | Disease | Method | PubMed ID | Year | Curated Way |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13391 | TVIS20004415 | Human Papillomavirus | HPV16 |
NC_001526.1 |
2894 | - | GRCh37.p5 | chr8 | 127254511 | 127254511 | q24.21 | ENSG00000287781, PCAT1 | Tumor | Oropharyngeal squamous cell carcinoma | Detection of integrated papilloma sequences & PCR (DIPS-PCR) | 24586376 | 2014 | VISDB1.0 |
| 13392 | TVIS20004417 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr8 | 63857113 | 63857113 | p12.3 | LINC01414 | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 13393 | TVIS20004418 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr8 | 63900301 | 63900301 | p12.3 | LINC01414 | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 13394 | TVIS20004441 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr8 | 40703860 | 40703860 | p11.21 | ZMAT4 | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 13395 | TVIS10014882 | Hepatitis B virus | - |
NC_003977.1 |
1539 | 1622 | GRCh37.p10 | chr8 | 41636404 | 41636685 | p11 | - | Cell line | Hepatocellular carcinoma | PCR and Sanger sequencing | 24582836 | 2014 | VISDB1.0 |
| 13396 | TVIS20005060 | Human Papillomavirus | HPV18 | Not given | - | - | hg19 | chr8 | 127730721 | 127794689 | q24.21 | MYC, ENSG00000308490, CASC11, PVT1 | Tumor | Neuroendocrine carcinoma | RNA-Seq+RT-PCR | 24390348 | 2014 | VISDB1.0 |
| 13397 | TVIS20005061 | Human Papillomavirus | HPV18 | Not given | - | - | hg19 | chr8 | 37693448 | 37694703 | p11.23 | ENSG00000308809 | Tumor | Squamous-cell carcinoma | RNA-Seq+RT-PCR | 24390348 | 2014 | VISDB1.0 |
| 13398 | TVIS20005062 | Human Papillomavirus | HPV18 | Not given | - | - | hg19 | chr8 | 127289767 | 127302514 | q24.21 | ENSG00000271509, CASC8, PCAT1 | Tumor | Neuroendocrine carcinoma | RNA-Seq+RT-PCR | 24390348 | 2014 | VISDB1.0 |
| 13399 | TVIS20005099 | Human Papillomavirus | HPV18 | Not given | - | - | hg19 | chr8 | 143419896 | 143428273 | q24.3 | MAFA | Tumor | Adenocarcinoma | RNA-Seq+RT-PCR | 24390348 | 2014 | VISDB1.0 |
| 13400 | TVIS20005100 | Human Papillomavirus | HPV18 | Not given | - | - | hg19 | chr8 | 143419680 | 143419996 | q24.3 | MAFA | Tumor | Adenocarcinoma | Whole-genome sequencing | 24390348 | 2014 | VISDB1.0 |
