Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004617 Human Papillomavirus HPV16 NC_001526.2
 3230 3264 hg19 9 97901303 97901338 q22.33 TRMO Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004618 Human Papillomavirus HPV16 NC_001526.2
 4353 4380 hg19 9 97929500 97929621 q22.33 HEMGN Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004620 Human Papillomavirus HPV16 NC_001526.2
 4692 4716 hg19 9 97902929 97902953 q22.33 TRMO Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004626 Human Papillomavirus HPV16 NC_001526.2
 5275 5314 hg19 9 97900414 97900444 q22.33 TRMO Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004627 Human Papillomavirus HPV16 NC_001526.2
 5970 5998 hg19 9 97940224 97940254 q22.33 HEMGN Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004632 Human Papillomavirus HPV16 NC_001526.2
 7438 7469 hg19 9 97942608 97942634 q22.33 HEMGN Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004633 Human Papillomavirus HPV16 NC_001526.2
 7438 7473 hg19 9 97942608 97942634 q22.33 HEMGN Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS10019936 Hepatitis B virus - NC_003977.1
 - - hg19 9 101600577 101600802 q31.1 GRIN3A Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS10019946 Hepatitis B virus - NC_003977.1
 - - hg19 9 129328405 129328616 q34.11 LINC02975, LINC01503 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS30004148 Human Immunodeficiency Virus - Not given - - hg19 9 486716 486716 p24.3 DOCK8-AS2, KANK1 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0