Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS10016525 Hepatitis B virus - NC_003977
 3210 3245 hg19 chr9 99035153 99035188 q22.33 COL15A1 Tumor Hepatocellular carcinoma Whole-genome sequencing 22267523 2012 VISDB1.0
TVIS10016526 Hepatitis B virus - NC_003977
 406 441 hg19 chr9 118966058 118966093 q33.1 ENSG00000302233 Tumor Hepatocellular carcinoma Whole-genome sequencing 22267523 2012 VISDB1.0
TVIS10016560 Hepatitis B virus - V01460.1
 1777 1799 hg19 chr9 41924055 41924116 p11.2 ENSG00000275297, CNTNAP3B Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 22267523 2012 VISDB1.0
TVIS43000018 Merkel cell polyomavirus - NC_010277
 - - NCBI36/hg18 chr9 - - - - Tumor Merkel cell carcinoma PCR and Sanger sequencing 21497292 2011 VISDB1.0
TVIS43000013 Merkel cell polyomavirus - NC_010277
 3337 - NCBI36/hg18 chr9 - - q33 - Tumor Merkel cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 20865165 2010 VISDB1.0
TVIS10016624 Hepatitis B virus - V01460.1
 - - Feb_2009_build chr9 104276989 104276989 q31.1 TOPORSLP, ENSG00000293400, ENSG00000297079 Nontumor Hepatocellular carcinoma Inverse nested PCR (invPCR) 20519397 2010 VISDB1.0
TVIS45000009 Xenotropic murine leukemia virus-related virus - Not given - - hg18 chr9 91918659 91918659 - ROR2 Cell line Prostate cancer Linker ligation-mediated PCR (LM-PCR) 20421928 2010 VISDB1.0
TVIS20004869 Human Papillomavirus HPV16 Not given 630 799 Unknown chr9 - - p24.3 - Cell line Cervical cancer Amplification of Papillomavirus Oncogene Transcripts (APOT) 18922896 2008 VISDB1.0
TVIS20005165 Human Papillomavirus HPV16 NC_001526.4
 - - hg18 chr9 - - p24.1 - Tumor Squamous-cell carcinoma APOT and PCR 18381461 2008 VISDB1.0
TVIS20005202 Human Papillomavirus HPV33 NC_001528
 - - hg18 chr9 - - q21.13 - Tumor Squamous-cell carcinoma APOT and PCR 18381461 2008 VISDB1.0