Search Results


VISDB ID Virus name Virus subtype Virus genome Breakpoint 1 Breakpoint 2 Human genome Chromosome hg38 start hg38 end Loci Target gene Sample Type Disease Method PubMed ID Year Curated way ▼
TVIS20004561 Human Papillomavirus HPV16 NC_001526.2
 1430 1455 hg19 X 145693638 145693668 q27.3 ENSG00000286085 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004566 Human Papillomavirus HPV16 NC_001526.2
 2965 2986 hg19 X 145708231 145708255 q27.3 ENSG00000286085 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004567 Human Papillomavirus HPV16 NC_001526.2
 3091 3111 hg19 X 145688743 145688759 q27.3 ENSG00000286085 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004568 Human Papillomavirus HPV16 NC_001526.2
 3156 3182 hg19 X 145716492 145716514 q27.3 ENSG00000286085 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004575 Human Papillomavirus HPV16 NC_001526.2
 4598 4613 hg19 X 145716531 145716575 q27.3 ENSG00000286085 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004590 Human Papillomavirus HPV16 NC_001526.2
 1361 1400 hg19 X 97125864 97125895 q21.33 DIAPH2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004592 Human Papillomavirus HPV16 NC_001526.2
 3073 3104 hg19 X 97114880 97114904 q21.33 DIAPH2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004593 Human Papillomavirus HPV16 NC_001526.2
 3245 3274 hg19 X 97118445 97118471 q21.33 DIAPH2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004594 Human Papillomavirus HPV16 NC_001526.2
 4983 5025 hg19 X 96960085 96960122 q21.33 DIAPH2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004595 Human Papillomavirus HPV16 NC_001526.2
 5459 5486 hg19 X 96983746 96983770 q21.33 DIAPH2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0