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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20005082 Human Papillomavirus HPV18 Not given - - hg19 12 94582314 94655966 q22 LSM3P2, ENSG00000308340, ENSG00000308321, TMCC3 Tumor Adenosquamous carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005083 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 20 42970571 43030034 q12 PTPRT-AS1, ENSG00000299658, PTPRT Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005084 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 X 8093686 8119785 p22.31 ENSG00000285679 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005085 Human Papillomavirus HPV45 Not given - - hg19 3 13778470 13778700 p25.1 - Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005086 Human Papillomavirus HPV18 Not given - - hg19 14 44934556 45030048 q21.2 TOGARAM1, KLHL28 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005087 Human Papillomavirus HPV18 Not given - - hg19 14 44939505 45029972 q21.2 TOGARAM1, KLHL28 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005088 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 7 62508811 62508944 q11.21 - Tumor Squamous-cell carcinoma Whole-genome sequencing 24390348 2014 VISDB1.0
TVIS20005089 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 12 41162393 41187110 q12 - Tumor Squamous-cell carcinoma Whole-genome sequencing 24390348 2014 VISDB1.0
TVIS20005090 Human Papillomavirus HPV18 Not given - - hg19 1 37540631 37540738 p34.3 ENSG00000307694, SNIP1 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005091 Human Papillomavirus HPV18 Not given - - hg19 3 153163454 153219532 q25.2 RAP2B, RN7SL300P, ENSG00000289885 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0