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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004416 Human Papillomavirus HPV16 NC_001526.1
 2908 - GRCh37.p5 chr7 104518626 104518626 q22.2 LHFPL3 Tumor Oropharyngeal squamous cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 24586376 2014 VISDB1.0
TVIS20004417 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr8 63857113 63857113 p12.3 LINC01414 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004418 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr8 63900301 63900301 p12.3 LINC01414 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004419 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr2 28267829 28267829 p23.2 ENSG00000305917, BABAM2 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004420 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr17 41668629 41668629 q21 - Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004421 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr18 35499051 35499051 q12.2 - Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004422 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr6 89081158 89081158 q15 PNRC1 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004423 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr1 629398 629398 p36.33 MTND1P23, ENSG00000293331, LINC00115 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004424 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr3 189849531 189849531 q28 TP63 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004425 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr22 31906205 31906205 q12.3 DEPDC5, ENSG00000285404 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0