Search Results
| No. | VISDB ID | Virus Name | Subtype | Virus Genome | Breakpoint 1 | Breakpoint 2 | Human Genome | Chr | Start | End | Loci | Target Gene | Sample Type | Disease | Method | PubMed ID | Year | Curated Way |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21 | TVIS20004416 | Human Papillomavirus | HPV16 |
NC_001526.1 |
2908 | - | GRCh37.p5 | chr7 | 104518626 | 104518626 | q22.2 | LHFPL3 | Tumor | Oropharyngeal squamous cell carcinoma | Detection of integrated papilloma sequences & PCR (DIPS-PCR) | 24586376 | 2014 | VISDB1.0 |
| 22 | TVIS20004417 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr8 | 63857113 | 63857113 | p12.3 | LINC01414 | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 23 | TVIS20004418 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr8 | 63900301 | 63900301 | p12.3 | LINC01414 | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 24 | TVIS20004419 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr2 | 28267829 | 28267829 | p23.2 | ENSG00000305917, BABAM2 | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 25 | TVIS20004420 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr17 | 41668629 | 41668629 | q21 | - | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 26 | TVIS20004421 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr18 | 35499051 | 35499051 | q12.2 | - | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 27 | TVIS20004422 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr6 | 89081158 | 89081158 | q15 | PNRC1 | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 28 | TVIS20004423 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr1 | 629398 | 629398 | p36.33 | MTND1P23, ENSG00000293331, LINC00115 | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 29 | TVIS20004424 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr3 | 189849531 | 189849531 | q28 | TP63 | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
| 30 | TVIS20004425 | Human Papillomavirus | HPV16 |
NC_001526.1 |
- | - | GRCh37.p5 | chr22 | 31906205 | 31906205 | q12.3 | DEPDC5, ENSG00000285404 | Tumor | Oropharyngeal squamous cell carcinoma | Amplification of Papillomavirus Oncogene Transcripts (APOT) | 24586376 | 2014 | VISDB1.0 |
