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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004318 Human Papillomavirus HPV16 AY686584
 4652 - GL000220.1 - - - - - Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005043 Human Papillomavirus HPV33 Not given 2061 - hg19 chr3 111780248 111780248 q13.2 PLCXD2, PHLDB2 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005044 Human Papillomavirus HPV33 Not given 2495 - hg19 chr3 111774722 111774722 q13.2 PLCXD2, PHLDB2 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005045 Human Papillomavirus HPV33 Not given 4043 - hg19 chr13 42932746 42932746 q14.11 ENSG00000298154, EPSTI1 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005046 Human Papillomavirus HPV33 Not given 3623 - hg19 chr13 42930464 42930464 q14.11 ENSG00000298154, EPSTI1 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005047 Human Papillomavirus HPV33 Not given 2460 - hg19 chr13 43104949 43104949 q14.11 DNAJC15 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005048 Human Papillomavirus HPV33 Not given 2999 - hg19 chr7 96662488 96662488 q21.3 SEM1 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005049 Human Papillomavirus HPV33 Not given 2391 - hg19 chr11 12876144 12876144 p15.3 TEAD1 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005050 Human Papillomavirus HPV33 Not given 5860 - hg19 chr11 12876184 12876184 p15.3 TEAD1 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005051 Human Papillomavirus HPV33 Not given 995 - hg19 chr17 33801905 33801905 q12 ENSG00000283417, ASIC2 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0