Search Results
VISDB ID | Virus Name | Subtype | Virus Genome | Breakpoint 1 | Breakpoint 2 | Human Genome | Chromosome | Start | End | Loci | Target Gene | Sample Type | Disease | Method | PubMed ID | Year | Curated Way ▼ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TVIS20007012 | Human Papillomavirus | HPV16 |
NC_001526.2 |
462 | - | hg19 | 1 | 10270 | 10271 | p36.33 | - | Tumor | Squamous cell carcinoma | Nanopore squencing | 32714374 | 2020 | ViMIC |
TVIS20007013 | Human Papillomavirus | HPV16 |
NC_001526.2 |
7362 | - | hg19 | 2 | 98826757 | 98826758 | q11.2 | CRACDL | Tumor | Squamous cell carcinoma | Nanopore squencing | 32714374 | 2020 | ViMIC |
TVIS20007014 | Human Papillomavirus | HPV16 |
NC_001526.2 |
3329 | - | hg19 | 3 | 189887315 | 189887316 | q28 | TP63 | Tumor | Squamous cell carcinoma | Nanopore squencing | 32714374 | 2020 | ViMIC |
TVIS20007015 | Human Papillomavirus | HPV16 |
NC_001526.2 |
322 | - | hg19 | X | 156030119 | 156030120 | q28 | - | Tumor | Squamous cell carcinoma | Nanopore squencing | 32714374 | 2020 | ViMIC |
TVIS20007016 | Human Papillomavirus | HPV16 |
NC_001526.2 |
214 | - | hg19 | 2 | 113602928 | 113602929 | q14.1 | DDX11L2, ENSG00000304466, RPL23AP7 | Tumor | Squamous cell carcinoma | Nanopore squencing | 32714374 | 2020 | ViMIC |
TVIS20007017 | Human Papillomavirus | HPV16 |
NC_001526.2 |
3295 | - | hg19 | 20 | 3579776 | 3579777 | p13 | ATRN | Tumor | Squamous cell carcinoma | Nanopore squencing | 32714374 | 2020 | ViMIC |
TVIS20007018 | Human Papillomavirus | HPV16 |
NC_001526.2 |
5311 | - | hg19 | 18 | 10186 | 10187 | p11.32 | - | Tumor | Squamous cell carcinoma | Nanopore squencing | 32714374 | 2020 | ViMIC |
TVIS20007019 | Human Papillomavirus | HPV16 |
NC_001526.2 |
7619 | - | hg19 | 6 | 7327855 | 7327856 | p24.3 | SSR1, CAGE1 | Tumor | Squamous cell carcinoma | Nanopore squencing | 32714374 | 2020 | ViMIC |
TVIS20007020 | Human Papillomavirus | HPV16 |
NC_001526.2 |
1276 | - | hg19 | 1 | 612455 | 612456 | p36.33 | ENSG00000293331, LINC00115 | Tumor | Squamous cell carcinoma | Nanopore squencing | 32714374 | 2020 | ViMIC |
TVIS20007021 | Human Papillomavirus | HPV16 |
NC_001526.2 |
3873 | - | hg19 | 12 | 80524820 | 80524821 | q21.31 | PTPRQ | Tumor | Squamous cell carcinoma | Nanopore squencing | 32714374 | 2020 | ViMIC |