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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20016852 Human Papillomavirus HPV16 HPV16REF
 3458 - hg19 chr9 13136000 13136000 p23 MPDZ Tumor derived xenograft Head and Neck squamous cell carcinoma Targeted Capture Sequencing, followed by integration sites detection by SearchHPV 34160069 2021 Curated
TVIS20016853 Human Papillomavirus HPV16 HPV16REF
 815;1019 - hg19 chr9 95697334 95697334 q22.32 ENSG00000228142 Tumor derived xenograft Head and Neck squamous cell carcinoma Targeted Capture Sequencing, followed by integration sites detection by SearchHPV 34160069 2021 Curated
TVIS20016854 Human Papillomavirus HPV16 HPV16REF
 815;1019 - hg19 chr9 95697506 95697506 q22.32 ENSG00000228142 Tumor derived xenograft Head and Neck squamous cell carcinoma Targeted Capture Sequencing, followed by integration sites detection by SearchHPV 34160069 2021 Curated
TVIS20016855 Human Papillomavirus HPV16 HPV16REF
 7579 - hg19 chrX 55605639 55605639 p11.21 ENSG00000302645 Tumor derived xenograft Head and Neck squamous cell carcinoma Targeted Capture Sequencing, followed by integration sites detection by SearchHPV 34160069 2021 Curated
TVIS20016856 Human Papillomavirus HPV16 HPV16REF
 2074 - hg19 chr9 136929069 136929069 q34.3 - Frozen HPV+ sample, TumorA Head and Neck squamous cell carcinoma Targeted Capture Sequencing, followed by integration sites detection by SearchHPV 34160069 2021 Curated
TVIS20016857 Human Papillomavirus HPV16 HPV16REF
 2443;471 - hg19 chr9 136904896 136904896 q34.3 TRAF2 Frozen HPV+ sample, TumorA Head and Neck squamous cell carcinoma Targeted Capture Sequencing, followed by integration sites detection by SearchHPV 34160069 2021 Curated
TVIS20016858 Human Papillomavirus HPV16 HPV16REF
 4030 - hg19 chr9 136906168 136906168 q34.3 TRAF2 Frozen HPV+ sample, TumorA Head and Neck squamous cell carcinoma Targeted Capture Sequencing, followed by integration sites detection by SearchHPV 34160069 2021 Curated
TVIS20016859 Human Papillomavirus HPV16 HPV16REF
 319 - hg19 chr9 136942434 136942434 q34.3 FBXW5 Frozen HPV+ sample, TumorA Head and Neck squamous cell carcinoma Targeted Capture Sequencing, followed by integration sites detection by SearchHPV 34160069 2021 Curated
TVIS20016860 Human Papillomavirus HPV16 HPV16REF
 4594 - hg19 chr9 136906964 136906964 q34.3 TRAF2 Frozen HPV+ sample, TumorA Head and Neck squamous cell carcinoma Targeted Capture Sequencing, followed by integration sites detection by SearchHPV 34160069 2021 Curated
TVIS20016861 Human Papillomavirus HPV16 HPV16REF
 3330 - hg19 chr15 81444291 81444291 q25.2 TMC3-AS1, ENSG00000259543 Frozen HPV+ sample, TumorA Head and Neck squamous cell carcinoma Targeted Capture Sequencing, followed by integration sites detection by SearchHPV 34160069 2021 Curated