Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019596 Human Papillomavirus HPV16 NC_001526.2
 1815 1816 hg19 19 2513042 2513043 p13.3 GNG7 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019597 Human Papillomavirus HPV16 NC_001526.2
 6491 6492 hg19 19 2521646 2521647 p13.3 GNG7 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019598 Human Papillomavirus HPV16 NC_001526.2
 6575 6576 hg19 X 148472764 148472765 q28 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019599 Human Papillomavirus HPV16 NC_001526.2
 2441 2442 hg19 12 118152336 118152337 q24.23 TAOK3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019600 Human Papillomavirus HPV16 NC_001526.2
 4571 4572 hg19 12 118152424 118152425 q24.23 TAOK3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019601 Human Papillomavirus HPV16 NC_001526.2
 2941 2942 hg19 13 33387161 33387162 q13.1 ENSG00000230490 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019602 Human Papillomavirus HPV16 NC_001526.2
 2832 2833 hg19 13 33387461 33387462 q13.1 ENSG00000230490 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019603 Human Papillomavirus HPV16 NC_001526.2
 3053 3054 hg19 20 50941815 50941816 q13.13 ADNP-AS1, DPM1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019604 Human Papillomavirus HPV16 NC_001526.2
 7556 7557 hg19 3 178414128 178414129 q26.32 KCNMB2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019605 Human Papillomavirus HPV16 NC_001526.2
 6958 6959 hg19 3 189403753 189403754 q28 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated