Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019616 Human Papillomavirus HPV16 NC_001526.2
 7334 7335 hg19 3 162781085 162781086 q26.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019617 Human Papillomavirus HPV16 NC_001526.2
 5845 5846 hg19 3 162786983 162786984 q26.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019618 Human Papillomavirus HPV16 NC_001526.2
 1755 1756 hg19 3 162786983 162786984 q26.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019619 Human Papillomavirus HPV16 NC_001526.2
 2419 2420 hg19 3 162794252 162794253 q26.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019620 Human Papillomavirus HPV16 NC_001526.2
 2418 2419 hg19 3 162908713 162908714 q26.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019621 Human Papillomavirus HPV16 NC_001526.2
 6749 6750 hg19 3 162935373 162935374 q26.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019622 Human Papillomavirus HPV16 NC_001526.2
 5894 5895 hg19 2 175970853 175970854 q31.1 LNPK Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019623 Human Papillomavirus HPV16 NC_001526.2
 3334 3335 hg19 20 14899584 14899585 p12.1 MACROD2-AS1, MACROD2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019624 Human Papillomavirus HPV16 NC_001526.2
 2358 2359 hg19 20 15288483 15288484 p12.1 MACROD2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019625 Human Papillomavirus HPV16 NC_001526.2
 4364 4365 hg19 3 103922156 103922157 q13.11 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated