Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019626 Human Papillomavirus HPV16 NC_001526.2
 4001 4002 hg19 3 163360672 163360673 q26.1 LINC01192 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019627 Human Papillomavirus HPV16 NC_001526.2
 5245 5246 hg19 3 163364346 163364347 q26.1 LINC01192 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019628 Human Papillomavirus HPV16 NC_001526.2
 4419 4420 hg19 3 163364615 163364616 q26.1 LINC01192 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019629 Human Papillomavirus HPV16 NC_001526.2
 7933 7934 hg19 3 163376323 163376324 q26.1 LINC01192 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019630 Human Papillomavirus HPV16 NC_001526.2
 190 191 hg19 3 163376391 163376392 q26.1 LINC01192 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019631 Human Papillomavirus HPV16 NC_001526.2
 2285 2286 hg19 9 82337234 82337235 q21.32 ENSG00000290551 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019632 Human Papillomavirus HPV16 NC_001526.2
 2292 2293 hg19 9 82339352 82339353 q21.32 ENSG00000290551 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019633 Human Papillomavirus HPV16 NC_001526.2
 5238 5239 hg19 9 82339561 82339562 q21.32 ENSG00000290551 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019634 Human Papillomavirus HPV16 NC_001526.2
 2290 2291 hg19 9 82341762 82341763 q21.32 ENSG00000290551 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019635 Human Papillomavirus HPV16 NC_001526.2
 5887 5888 hg19 9 82342336 82342337 q21.32 ENSG00000290551 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated