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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019656 Human Papillomavirus HPV16 NC_001526.2
 3525 3526 hg19 16 22612701 22612702 p12.2 LINC02890 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019657 Human Papillomavirus HPV16 NC_001526.2
 1629 1630 hg19 18 31407279 31407280 q12.1 DSG1-AS1, DSG4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019658 Human Papillomavirus HPV16 NC_001526.2
 6349 6350 hg19 18 31409170 31409171 q12.1 DSG1-AS1, DSG4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019659 Human Papillomavirus HPV16 NC_001526.2
 2892 2893 hg19 11 9306371 9306372 p15.4 TMEM41B Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019660 Human Papillomavirus HPV16 NC_001526.2
 4037 4038 hg19 11 9313453 9313454 p15.4 TMEM41B Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019661 Human Papillomavirus HPV16 NC_001526.2
 2615 2616 hg19 11 9326855 9326856 p15.4 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019662 Human Papillomavirus HPV16 NC_001526.2
 330 331 hg19 11 9328939 9328940 p15.4 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019663 Human Papillomavirus HPV16 NC_001526.2
 255 256 hg19 11 9328939 9328940 p15.4 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019664 Human Papillomavirus HPV16 NC_001526.2
 7904 7905 hg19 11 9328941 9328942 p15.4 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019665 Human Papillomavirus HPV16 NC_001526.2
 1515 1516 hg19 11 9338291 9338292 p15.4 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated