Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019666 Human Papillomavirus HPV16 NC_001526.2
 1788 1789 hg19 11 9343369 9343370 p15.4 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019667 Human Papillomavirus HPV16 NC_001526.2
 0 1 hg19 11 9343370 9343371 p15.4 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019668 Human Papillomavirus HPV16 NC_001526.2
 7728 7729 hg19 11 9343377 9343378 p15.4 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019669 Human Papillomavirus HPV16 NC_001526.2
 2016 2017 hg19 11 9370495 9370496 p15.4 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019670 Human Papillomavirus HPV16 NC_001526.2
 2189 2190 hg19 11 9370851 9370852 p15.4 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019671 Human Papillomavirus HPV16 NC_001526.2
 795 796 hg19 11 9374740 9374741 p15.4 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019672 Human Papillomavirus HPV16 NC_001526.2
 3126 3127 hg19 4 38338860 38338861 p14 LINC02513 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019673 Human Papillomavirus HPV16 NC_001526.2
 1690 1691 hg19 4 38340758 38340759 p14 LINC02513 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019674 Human Papillomavirus HPV16 NC_001526.2
 3125 3126 hg19 4 38343776 38343777 p14 LINC02513 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019675 Human Papillomavirus HPV16 NC_001526.2
 6052 6053 hg19 1 97924590 97924591 p21.3 ENSG00000300799, DPYD Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated