Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019746 Human Papillomavirus HPV16 NC_001526.2
 4841 4842 hg19 2 113263281 113263282 q14.1 PAX8-AS1, PAX8 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019747 Human Papillomavirus HPV16 NC_001526.2
 6671 6672 hg19 2 113263490 113263491 q14.1 PAX8-AS1, PAX8 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019748 Human Papillomavirus HPV16 NC_001526.2
 28 29 hg19 2 113264005 113264006 q14.1 PAX8-AS1, PAX8 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019749 Human Papillomavirus HPV16 NC_001526.2
 2529 2530 hg19 2 113264235 113264236 q14.1 PAX8-AS1, PAX8 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019750 Human Papillomavirus HPV16 NC_001526.2
 7785 7786 hg19 2 113264326 113264327 q14.1 PAX8-AS1, PAX8 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019751 Human Papillomavirus HPV16 NC_001526.2
 4226 4227 hg19 2 113264561 113264562 q14.1 PAX8-AS1, PAX8 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019752 Human Papillomavirus HPV16 NC_001526.2
 4135 4136 hg19 2 113264598 113264599 q14.1 PAX8-AS1, PAX8 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019753 Human Papillomavirus HPV16 NC_001526.2
 6624 6625 hg19 2 113264604 113264605 q14.1 PAX8-AS1, PAX8 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019754 Human Papillomavirus HPV16 NC_001526.2
 2316 2317 hg19 2 197757561 197757562 q33.1 BOLL, ENSG00000222017 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019755 Human Papillomavirus HPV16 NC_001526.2
 1503 1504 hg19 3 96131401 96131402 q11.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated