Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019756 Human Papillomavirus HPV16 NC_001526.2
 1678 1679 hg19 3 130977573 130977574 q22.1 ATP2C1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019757 Human Papillomavirus HPV16 NC_001526.2
 6885 6886 hg19 4 1773370 1773371 p16.3 ENSG00000298459 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019758 Human Papillomavirus HPV16 NC_001526.2
 6843 6844 hg19 4 1943872 1943873 p16.3 NSD2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019759 Human Papillomavirus HPV16 NC_001526.2
 111 112 hg19 4 1949188 1949189 p16.3 NSD2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019760 Human Papillomavirus HPV16 NC_001526.2
 7929 7930 hg19 4 1949349 1949350 p16.3 NSD2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019761 Human Papillomavirus HPV16 NC_001526.2
 2957 2958 hg19 4 59655178 59655179 q13.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019762 Human Papillomavirus HPV16 NC_001526.2
 3331 3332 hg19 4 59655418 59655419 q13.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019763 Human Papillomavirus HPV16 NC_001526.2
 7670 7671 hg19 4 59660048 59660049 q13.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019764 Human Papillomavirus HPV16 NC_001526.2
 7656 7657 hg19 6 981851 981852 p25.3 LINC01622 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019765 Human Papillomavirus HPV16 NC_001526.2
 4897 4898 hg19 6 28946800 28946801 p22.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated