Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019766 Human Papillomavirus HPV16 NC_001526.2
 1692 1693 hg19 6 60500216 60500217 q11.1 PRIM2BP, ENSG00000290597 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019767 Human Papillomavirus HPV16 NC_001526.2
 7699 7700 hg19 6 58452482 58452483 p11.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019768 Human Papillomavirus HPV16 NC_001526.2
 50 51 hg19 6 58452552 58452553 p11.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019769 Human Papillomavirus HPV16 NC_001526.2
 429 430 hg19 6 58452553 58452554 p11.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019770 Human Papillomavirus HPV16 NC_001526.2
 3769 3770 hg19 6 61727519 61727520 q11.1 KHDRBS2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019771 Human Papillomavirus HPV16 NC_001526.2
 2058 2059 hg19 6 149118490 149118491 q25.1 ENSG00000308521 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019772 Human Papillomavirus HPV16 NC_001526.2
 244 245 hg19 8 137452017 137452018 q24.23 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019773 Human Papillomavirus HPV16 NC_001526.2
 6954 6955 hg19 9 106573905 106573906 q31.2 LINC01505 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019774 Human Papillomavirus HPV16 NC_001526.2
 7278 7279 hg19 12 90755659 90755660 q21.33 LINC02822, ENSG00000288102 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019775 Human Papillomavirus HPV16 NC_001526.2
 2532 2533 hg19 12 90916474 90916475 q21.33 CCER1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated