Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019776 Human Papillomavirus HPV16 NC_001526.2
 2747 2748 hg19 12 90916657 90916658 q21.33 CCER1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019777 Human Papillomavirus HPV16 NC_001526.2
 2454 2455 hg19 10 4627594 4627595 p15.1 MANCR Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019778 Human Papillomavirus HPV16 NC_001526.2
 2352 2353 hg19 10 4791708 4791709 p15.1 AKR1E2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019779 Human Papillomavirus HPV16 NC_001526.2
 4246 4247 hg19 4 90873772 90873773 q22.1 CCSER1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019780 Human Papillomavirus HPV16 NC_001526.2
 3033 3034 hg19 4 182783720 182783721 q35.1 TENM3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019781 Human Papillomavirus HPV16 NC_001526.2
 7480 7481 hg19 4 182816741 182816742 q35.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019782 Human Papillomavirus HPV16 NC_001526.2
 4008 4009 hg19 4 182841905 182841906 q35.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019783 Human Papillomavirus HPV16 NC_001526.2
 1129 1130 hg19 17 13415321 13415322 p12 ENSG00000300019 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019784 Human Papillomavirus HPV16 NC_001526.2
 7838 7839 hg19 17 13415423 13415424 p12 ENSG00000300019 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019785 Human Papillomavirus HPV16 NC_001526.2
 353 354 hg19 3 189926924 189926925 q28 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated