Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019786 Human Papillomavirus HPV16 NC_001526.2
 2356 2357 hg19 3 189962644 189962645 q28 P3H2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019787 Human Papillomavirus HPV16 NC_001526.2
 3553 3554 hg19 7 152096452 152096453 q36.1 GALNT11 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019788 Human Papillomavirus HPV16 NC_001526.2
 2671 2672 hg19 7 152096710 152096711 q36.1 GALNT11 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019789 Human Papillomavirus HPV16 NC_001526.2
 5905 5906 hg19 7 152107191 152107192 q36.1 ENSG00000310074, GALNT11 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019790 Human Papillomavirus HPV16 NC_001526.2
 1483 1484 hg19 19 45077733 45077734 q13.32 GEMIN7-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019791 Human Papillomavirus HPV16 NC_001526.2
 5173 5174 hg19 19 45077774 45077775 q13.32 GEMIN7-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019792 Human Papillomavirus HPV16 NC_001526.2
 2994 2995 hg19 2 122480171 122480172 q14.3 ENSG00000287871, ENSG00000286481 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019793 Human Papillomavirus HPV33 HQ537707.1
 2411 2412 hg19 4 113829663 113829664 q26 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019794 Human Papillomavirus HPV16 NC_001526.2
 1470 1471 hg19 2 118068059 118068060 q14.1 ENSG00000297418 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019795 Human Papillomavirus HPV16 NC_001526.2
 4730 4731 hg19 2 118734322 118734323 q14.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated