Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019796 Human Papillomavirus HPV16 NC_001526.2
 1482 1483 hg19 2 123477427 123477428 q14.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019797 Human Papillomavirus HPV16 NC_001526.2
 2218 2219 hg19 2 123578796 123578797 q14.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019798 Human Papillomavirus HPV16 NC_001526.2
 0 1 hg19 2 123578807 123578808 q14.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019799 Human Papillomavirus HPV16 NC_001526.2
 7701 7702 hg19 2 123578818 123578819 q14.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019800 Human Papillomavirus HPV16 NC_001526.2
 5074 5075 hg19 1 78568171 78568172 p31.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019801 Human Papillomavirus HPV16 NC_001526.2
 5189 5190 hg19 2 140888847 140888848 q22.1 LRP1B Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019802 Human Papillomavirus HPV16 NC_001526.2
 4203 4204 hg19 8 4187278 4187279 p23.2 CSMD1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019803 Human Papillomavirus HPV16 NC_001526.2
 2972 2973 hg19 8 4187781 4187782 p23.2 CSMD1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019804 Human Papillomavirus HPV16 NC_001526.2
 4341 4342 hg19 9 28842917 28842918 p21.1 LINGO2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019805 Human Papillomavirus HPV16 NC_001526.2
 4391 4392 hg19 9 29193341 29193342 p21.1 LINGO2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated