Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019806 Human Papillomavirus HPV16 NC_001526.2
 6014 6015 hg19 10 16824934 16824935 p13 CUBN Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019807 Human Papillomavirus HPV16 NC_001526.2
 7564 7565 hg19 10 16835078 16835079 p13 CUBN Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019808 Human Papillomavirus HPV16 NC_001526.2
 7473 7474 hg19 10 16837762 16837763 p13 CUBN Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019809 Human Papillomavirus HPV16 NC_001526.2
 4478 4479 hg19 19 3284615 3284616 p13.3 CELF5 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019810 Human Papillomavirus HPV16 NC_001526.2
 6045 6046 hg19 19 3289556 3289557 p13.3 CELF5 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019811 Human Papillomavirus HPV16 NC_001526.2
 6231 6232 hg19 19 3329639 3329640 p13.3 ENSG00000305183, NFIC Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019812 Human Papillomavirus HPV16 NC_001526.2
 2906 2907 hg19 19 5576782 5576783 p13.3 SNRPEP4, TINCR Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019813 Human Papillomavirus HPV16 NC_001526.2
 4691 4692 hg19 19 5582078 5582079 p13.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019814 Human Papillomavirus HPV16 NC_001526.2
 930 931 hg19 19 5586135 5586136 p13.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019815 Human Papillomavirus HPV16 NC_001526.2
 4560 4561 hg19 19 5590693 5590694 p13.3 SAFB2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated