Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019816 Human Papillomavirus HPV16 NC_001526.2
 4684 4685 hg19 19 5590923 5590924 p13.3 SAFB2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019817 Human Papillomavirus HPV16 NC_001526.2
 7192 7193 hg19 2 113389991 113389992 q14.1 LINC02966 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019818 Human Papillomavirus HPV16 NC_001526.2
 7289 7290 hg19 2 113471431 113471432 q14.1 ZNG1B Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019819 Human Papillomavirus HPV16 NC_001526.2
 6764 6765 hg19 22 41116965 41116966 q13.2 EP300 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019820 Human Papillomavirus HPV16 NC_001526.2
 5393 5394 hg19 22 41141057 41141058 q13.2 EP300 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019821 Human Papillomavirus HPV16 NC_001526.2
 3841 3842 hg19 22 41141442 41141443 q13.2 EP300, EP300-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019822 Human Papillomavirus HPV16 NC_001526.2
 2208 2209 hg19 22 41143291 41143292 q13.2 EP300, EP300-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019823 Human Papillomavirus HPV16 NC_001526.2
 1150 1151 hg19 22 41143832 41143833 q13.2 EP300, EP300-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019824 Human Papillomavirus HPV16 NC_001526.2
 5214 5215 hg19 22 41144485 41144486 q13.2 EP300, EP300-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019825 Human Papillomavirus HPV16 NC_001526.2
 5424 5425 hg19 22 41144620 41144621 q13.2 EP300, EP300-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated