Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019836 Human Papillomavirus HPV16 NC_001526.2
 2164 2165 hg19 22 41177523 41177524 q13.2 EP300, EP300-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019837 Human Papillomavirus HPV16 NC_001526.2
 1993 1994 hg19 22 41177523 41177524 q13.2 EP300, EP300-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019838 Human Papillomavirus HPV16 NC_001526.2
 1200 1201 hg19 3 85076795 85076796 p12.1 CADM2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019839 Human Papillomavirus HPV16 NC_001526.2
 6855 6856 hg19 4 19106609 19106610 p15.31 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019840 Human Papillomavirus HPV16 NC_001526.2
 1023 1024 hg19 4 19110319 19110320 p15.31 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019841 Human Papillomavirus HPV16 NC_001526.2
 7356 7357 hg19 4 19129193 19129194 p15.31 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019842 Human Papillomavirus HPV16 NC_001526.2
 659 660 hg19 5 179941288 179941289 q35.3 RNF130 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019843 Human Papillomavirus HPV16 NC_001526.2
 126 127 hg19 5 179978367 179978368 q35.3 ENSG00000285865, RNF130 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019844 Human Papillomavirus HPV16 NC_001526.2
 4457 4458 hg19 5 179997575 179997576 q35.3 RNF130 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019845 Human Papillomavirus HPV16 NC_001526.2
 2377 2378 hg19 5 179998869 179998870 q35.3 RNF130 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated