Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019846 Human Papillomavirus HPV16 NC_001526.2
 229 230 hg19 5 180003368 180003369 q35.3 RNF130 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019847 Human Papillomavirus HPV16 NC_001526.2
 1377 1378 hg19 5 180003483 180003484 q35.3 RNF130 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019848 Human Papillomavirus HPV16 NC_001526.2
 2710 2711 hg19 5 180005833 180005834 q35.3 RNF130 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019849 Human Papillomavirus HPV16 NC_001526.2
 5942 5943 hg19 5 180015513 180015514 q35.3 RNF130 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019850 Human Papillomavirus HPV16 NC_001526.2
 5942 5943 hg19 5 180015754 180015755 q35.3 RNF130 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019851 Human Papillomavirus HPV16 NC_001526.2
 2696 2697 hg19 8 87024188 87024189 q21.3 CNBD1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019852 Human Papillomavirus HPV16 NC_001526.2
 4872 4873 hg19 9 5340208 5340209 p24.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019853 Human Papillomavirus HPV16 NC_001526.2
 3075 3076 hg19 9 5349395 5349396 p24.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019854 Human Papillomavirus HPV16 NC_001526.2
 4837 4838 hg19 9 5375922 5375923 p24.1 PLGRKT Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019855 Human Papillomavirus HPV16 NC_001526.2
 4274 4275 hg19 9 5400977 5400978 p24.1 PLGRKT Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated