Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019866 Human Papillomavirus HPV16 NC_001526.2
 5169 5170 hg19 9 5438505 5438506 p24.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019867 Human Papillomavirus HPV16 NC_001526.2
 4514 4515 hg19 9 5440240 5440241 p24.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019868 Human Papillomavirus HPV16 NC_001526.2
 5293 5294 hg19 9 5447030 5447031 p24.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019869 Human Papillomavirus HPV16 NC_001526.2
 1311 1312 hg19 9 5453491 5453492 p24.1 CD274 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019870 Human Papillomavirus HPV16 NC_001526.2
 3539 3540 hg19 12 26741238 26741239 p11.23 ITPR2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019871 Human Papillomavirus HPV16 NC_001526.2
 5902 5903 hg19 12 26755343 26755344 p11.23 ITPR2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019872 Human Papillomavirus HPV16 NC_001526.2
 1542 1543 hg19 12 28449169 28449170 p11.22 CCDC91 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019873 Human Papillomavirus HPV16 NC_001526.2
 4877 4878 hg19 3 109432782 109432783 q13.13 LINC01205 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019874 Human Papillomavirus HPV16 NC_001526.2
 3958 3959 hg19 5 165706078 165706079 q34 ENSG00000253693 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019875 Human Papillomavirus HPV16 NC_001526.2
 6958 6959 hg19 5 165710384 165710385 q34 ENSG00000253693 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated