Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019876 Human Papillomavirus HPV16 NC_001526.2
 7248 7249 hg19 6 60579077 60579078 q11.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019877 Human Papillomavirus HPV16 NC_001526.2
 2160 2161 hg19 1 8972913 8972914 p36.23 CA6 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019878 Human Papillomavirus HPV16 NC_001526.2
 4836 4837 hg19 1 9375100 9375101 p36.22 ENSG00000296056 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019879 Human Papillomavirus HPV16 NC_001526.2
 2651 2652 hg19 8 127861017 127861018 q24.21 PVT1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019880 Human Papillomavirus HPV16 NC_001526.2
 6045 6046 hg19 8 127861025 127861026 q24.21 PVT1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019881 Human Papillomavirus HPV16 NC_001526.2
 4479 4480 hg19 12 30505455 30505456 p11.21 ENSG00000305310, ENSG00000305296 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019882 Human Papillomavirus HPV16 NC_001526.2
 7253 7254 hg19 12 30636640 30636641 p11.21 IPO8 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019883 Human Papillomavirus HPV16 NC_001526.2
 4355 4356 hg19 13 69374480 69374481 q21.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019884 Human Papillomavirus HPV16 NC_001526.2
 2080 2081 hg19 19 36265334 36265335 q13.12 ENSG00000267053, LINC00665 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019885 Human Papillomavirus HPV16 NC_001526.2
 2043 2044 hg19 19 36267383 36267384 q13.12 ENSG00000267053, LINC00665 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated