Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019886 Human Papillomavirus HPV16 NC_001526.2
 3189 3190 hg19 13 55237472 55237473 q21.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019887 Human Papillomavirus HPV16 NC_001526.2
 6651 6652 hg19 13 55237855 55237856 q21.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019888 Human Papillomavirus HPV16 NC_001526.2
 6026 6027 hg19 1 189524640 189524641 q31.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019889 Human Papillomavirus HPV16 NC_001526.2
 4543 4544 hg19 1 189674996 189674997 q31.1 LINC01701 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019890 Human Papillomavirus HPV16 NC_001526.2
 921 922 hg19 1 189691177 189691178 q31.1 LINC01701 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019891 Human Papillomavirus HPV16 NC_001526.2
 624 625 hg19 1 189719933 189719934 q31.1 LINC01701 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019892 Human Papillomavirus HPV16 NC_001526.2
 12 13 hg19 1 189720678 189720679 q31.1 LINC01701 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019893 Human Papillomavirus HPV16 NC_001526.2
 3551 3552 hg19 1 189725593 189725594 q31.1 LINC01701 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019894 Human Papillomavirus HPV16 NC_001526.2
 252 253 hg19 21 8573937 8573938 p11.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019895 Human Papillomavirus HPV16 NC_001526.2
 1671 1672 hg19 4 38663786 38663787 p14 KLF3-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated