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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019896 Human Papillomavirus HPV16 NC_001526.2
 3253 3254 hg19 4 38664256 38664257 p14 KLF3-AS1, KLF3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019897 Human Papillomavirus HPV16 NC_001526.2
 841 842 hg19 1 28630484 28630485 p35.3 TAF12 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019898 Human Papillomavirus HPV16 NC_001526.2
 597 598 hg19 1 28630570 28630571 p35.3 TAF12 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019899 Human Papillomavirus HPV16 NC_001526.2
 7143 7144 hg19 1 28630585 28630586 p35.3 TAF12 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019900 Human Papillomavirus HPV16 NC_001526.2
 7501 7502 hg19 1 28630585 28630586 p35.3 TAF12 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019901 Human Papillomavirus HPV16 NC_001526.2
 3617 3618 hg19 15 40012707 40012708 q15.1 ENSG00000306490, EIF2AK4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019902 Human Papillomavirus HPV16 NC_001526.2
 1351 1352 hg19 15 40013539 40013540 q15.1 ENSG00000306490, EIF2AK4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019903 Human Papillomavirus HPV16 NC_001526.2
 5294 5295 hg19 2 28667092 28667093 p23.2 ENSG00000230730 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019904 Human Papillomavirus HPV16 NC_001526.2
 3401 3402 hg19 20 1864340 1864341 p13 ENSG00000286288 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019905 Human Papillomavirus HPV16 NC_001526.2
 3022 3023 hg19 20 1866205 1866206 p13 ENSG00000286288 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated