Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019906 Human Papillomavirus HPV16 NC_001526.2
 5589 5590 hg19 3 175187652 175187653 q26.31 NAALADL2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019907 Human Papillomavirus HPV16 NC_001526.2
 6423 6424 hg19 4 177707949 177707950 q34.3 LINC01099 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019908 Human Papillomavirus HPV16 NC_001526.2
 5601 5602 hg19 4 177707966 177707967 q34.3 LINC01099 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019909 Human Papillomavirus HPV16 NC_001526.2
 6921 6922 hg19 9 129156741 129156742 q34.11 ENSG00000235007 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019910 Human Papillomavirus HPV16 NC_001526.2
 7762 7763 hg19 9 129171743 129171744 q34.11 ENSG00000235007 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019911 Human Papillomavirus HPV16 NC_001526.2
 7864 7865 hg19 9 129171937 129171938 q34.11 ENSG00000235007 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019912 Human Papillomavirus HPV16 NC_001526.2
 7656 7657 hg19 9 129171947 129171948 q34.11 ENSG00000235007 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019913 Human Papillomavirus HPV16 NC_001526.2
 5597 5598 hg19 9 129175430 129175431 q34.11 ENSG00000235007 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019914 Human Papillomavirus HPV16 NC_001526.2
 5899 5900 hg19 9 129175431 129175432 q34.11 ENSG00000235007 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019915 Human Papillomavirus HPV16 NC_001526.2
 5603 5604 hg19 9 129175691 129175692 q34.11 IER5L, ENSG00000235007 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated