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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019916 Human Papillomavirus HPV16 NC_001526.2
 5043 5044 hg19 chr9 129176765 129176766 q34.11 IER5L, ENSG00000235007, IER5L-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019917 Human Papillomavirus HPV16 NC_001526.2
 2459 2460 hg19 chr9 129177371 129177372 q34.11 IER5L, ENSG00000235007, IER5L-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019918 Human Papillomavirus HPV16 NC_001526.2
 770 771 hg19 chr9 129178046 129178047 q34.11 IER5L, ENSG00000235007, IER5L-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019919 Human Papillomavirus HPV16 NC_001526.2
 1007 1008 hg19 chr9 129178195 129178196 q34.11 IER5L, ENSG00000235007, IER5L-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019920 Human Papillomavirus HPV16 NC_001526.2
 7593 7594 hg19 chr9 129200897 129200898 q34.11 ENSG00000235007, IER5L-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019921 Human Papillomavirus HPV16 NC_001526.2
 3719 3720 hg19 chr19 852752 852753 p13.3 ELANE Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019922 Human Papillomavirus HPV16 NC_001526.2
 3170 3171 hg19 chr19 854298 854299 p13.3 ELANE Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019923 Human Papillomavirus HPV16 NC_001526.2
 4101 4102 hg19 chr19 34604518 34604519 q13.11 SCGB1B2P, SCGB2B2, ENSG00000306401 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019924 Human Papillomavirus HPV16 NC_001526.2
 4353 4354 hg19 chr19 34666391 34666392 q13.11 SCGB1B2P, SCGB2B2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019925 Human Papillomavirus HPV16 NC_001526.2
 5968 5969 hg19 chrX 143576603 143576604 q27.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated