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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019926 Human Papillomavirus HPV16 NC_001526.2
 4362 4363 hg19 chrX 143576607 143576608 q27.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019927 Human Papillomavirus HPV16 NC_001526.2
 5522 5523 hg19 chr6 7167774 7167775 p24.3 RREB1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019928 Human Papillomavirus HPV16 NC_001526.2
 3513 3514 hg19 chr6 7184768 7184769 p24.3 ENSG00000225092, RREB1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019929 Human Papillomavirus HPV16 NC_001526.2
 2653 2654 hg19 chr6 7264399 7264400 p24.3 ENSG00000238221 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019930 Human Papillomavirus HPV16 NC_001526.2
 1934 1935 hg19 chr8 127372395 127372396 q24.21 CASC8, POU5F1B, PCAT1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019931 Human Papillomavirus HPV16 NC_001526.2
 1927 1928 hg19 chr8 127406436 127406437 q24.21 CASC8, POU5F1B, PCAT1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019932 Human Papillomavirus HPV33 HQ537707.1
 1049 1050 hg19 chr3 181861856 181861857 q26.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019933 Human Papillomavirus HPV33 HQ537707.1
 2150 2151 hg19 chr3 181989967 181989968 q26.33 LINC01206 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019934 Human Papillomavirus HPV33 HQ537707.1
 2294 2295 hg19 chr3 181992216 181992217 q26.33 LINC01206 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019935 Human Papillomavirus HPV33 HQ537707.1
 6695 6696 hg19 chr3 181992238 181992239 q26.33 LINC01206 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated