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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019936 Human Papillomavirus HPV16 NC_001526.2
 3168 3169 hg19 chr1 200487872 200487873 q32.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019937 Human Papillomavirus HPV16 NC_001526.2
 3205 3206 hg19 chr2 32916440 32916441 p22.3 LINC00486, ENSG00000293668, ENSG00000294557 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019938 Human Papillomavirus HPV16 NC_001526.2
 3349 3350 hg19 chr8 81842357 81842358 q21.13 SNX16, LINC02235 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019939 Human Papillomavirus HPV35 M74117.1
 3760 3761 hg19 chr19 30969083 30969084 q12 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019940 Human Papillomavirus HPV35 M74117.1
 3772 3773 hg19 chr19 30972696 30972697 q12 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019941 Human Papillomavirus HPV16 NC_001526.2
 2166 2167 hg19 chr8 127715326 127715327 q24.21 CASC11 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019942 Human Papillomavirus HPV16 NC_001526.2
 1760 1761 hg19 chr8 127753880 127753881 q24.21 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019943 Human Papillomavirus HPV16 NC_001526.2
 1803 1804 hg19 chr8 127781420 127781421 q24.21 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019944 Human Papillomavirus HPV16 NC_001526.2
 3041 3042 hg19 chr1 2869828 2869829 p36.32 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019945 Human Papillomavirus HPV16 NC_001526.2
 5860 5861 hg19 chr1 24107869 24107870 p36.11 MYOM3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated