Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019956 Human Papillomavirus HPV16 NC_001526.2
 5494 5495 hg19 chr13 71350929 71350930 q21.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019957 Human Papillomavirus HPV16 NC_001526.2
 3360 3361 hg19 chr14 98682146 98682147 q32.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019958 Human Papillomavirus HPV16 NC_001526.2
 2895 2896 hg19 chr14 98684409 98684410 q32.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019959 Human Papillomavirus HPV16 NC_001526.2
 1685 1686 hg19 chr17 9631670 9631671 p13.1 CFAP52 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019960 Human Papillomavirus HPV16 NC_001526.2
 4643 4644 hg19 chr17 9635407 9635408 p13.1 CFAP52 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019961 Human Papillomavirus HPV16 NC_001526.2
 978 979 hg19 chr17 9653322 9653323 p13.1 USP43 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019962 Human Papillomavirus HPV16 NC_001526.2
 496 497 hg19 chr18 29432547 29432548 q12.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019963 Human Papillomavirus HPV16 NC_001526.2
 2868 2869 hg19 chr18 29433536 29433537 q12.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019964 Human Papillomavirus HPV16 NC_001526.2
 444 445 hg19 chr18 29441802 29441803 q12.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019965 Human Papillomavirus HPV16 NC_001526.2
 2904 2905 hg19 chr2 83424589 83424590 p11.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated