Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019986 Human Papillomavirus HPV16 NC_001526.2
 2888 2889 hg19 chr4 70124056 70124057 q13.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019987 Human Papillomavirus HPV16 NC_001526.2
 7124 7125 hg19 chr4 70124076 70124077 q13.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019988 Human Papillomavirus HPV16 NC_001526.2
 6142 6143 hg19 chr4 70160385 70160386 q13.3 PRR27 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019989 Human Papillomavirus HPV16 NC_001526.2
 1692 1693 hg19 chr5 8320879 8320880 p15.31 LINC02226 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019990 Human Papillomavirus HPV16 NC_001526.2
 456 457 hg19 chr5 8320910 8320911 p15.31 LINC02226 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019991 Human Papillomavirus HPV16 NC_001526.2
 2696 2697 hg19 chr6 29376985 29376986 p22.1 OR5V1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019992 Human Papillomavirus HPV16 NC_001526.2
 3526 3527 hg19 chr6 29400035 29400036 p22.1 OR5V1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019993 Human Papillomavirus HPV16 NC_001526.2
 5681 5682 hg19 chr6 29400056 29400057 p22.1 OR5V1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019994 Human Papillomavirus HPV16 NC_001526.2
 5228 5229 hg19 chr6 29400188 29400189 p22.1 OR5V1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019995 Human Papillomavirus HPV16 NC_001526.2
 1126 1127 hg19 chr6 29401784 29401785 p22.1 OR5V1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated