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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020016 Human Papillomavirus HPV16 NC_001526.2
 6514 6515 hg19 chr18 3001620 3001621 p11.31 LPIN2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020017 Human Papillomavirus HPV16 NC_001526.2
 4827 4828 hg19 chr18 3013525 3013526 p11.31 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020018 Human Papillomavirus HPV16 NC_001526.2
 7752 7753 hg19 chr11 69169163 69169164 q13.3 ENSG00000261070, ENSG00000306716 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020019 Human Papillomavirus HPV16 NC_001526.2
 703 704 hg19 chr11 69202827 69202828 q13.3 ENSG00000301530 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020020 Human Papillomavirus HPV16 NC_001526.2
 5258 5259 hg19 chr11 69506198 69506199 q13.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020021 Human Papillomavirus HPV16 NC_001526.2
 3432 3433 hg19 chr14 26821165 26821166 q12 LINC02294, LINC02293, NOVA1-DT Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020022 Human Papillomavirus HPV16 NC_001526.2
 3621 3622 hg19 chr14 30567018 30567019 q12 G2E3, G2E3-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020023 Human Papillomavirus HPV16 NC_001526.2
 932 933 hg19 chr6 75843206 75843207 q14.1 MYO6 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020024 Human Papillomavirus HPV16 NC_001526.2
 6046 6047 hg19 chr6 75849421 75849422 q14.1 MYO6 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020025 Human Papillomavirus HPV16 NC_001526.2
 3164 3165 hg19 chr6 75851475 75851476 q14.1 MYO6 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated