Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020026 Human Papillomavirus HPV16 NC_001526.2
 4903 4904 hg19 chr6 75851910 75851911 q14.1 MYO6 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020027 Human Papillomavirus HPV16 NC_001526.2
 7524 7525 hg19 chr6 75852783 75852784 q14.1 MYO6 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020028 Human Papillomavirus HPV16 NC_001526.2
 1411 1412 hg19 chr6 75853031 75853032 q14.1 MYO6 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020029 Human Papillomavirus HPV16 NC_001526.2
 1582 1583 hg19 chr6 75864054 75864055 q14.1 MYO6 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020030 Human Papillomavirus HPV16 NC_001526.2
 3472 3473 hg19 chr1 1795692 1795693 p36.33 ENSG00000302550, GNB1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020031 Human Papillomavirus HPV16 NC_001526.2
 4107 4108 hg19 chr1 2219564 2219565 p36.33 ENSG00000234396 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020032 Human Papillomavirus HPV16 NC_001526.2
 2722 2723 hg19 chr11 96112235 96112236 q21 ENSG00000285921, MAML2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020033 Human Papillomavirus HPV16 NC_001526.2
 2897 2898 hg19 chr11 96112249 96112250 q21 ENSG00000285921, MAML2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020034 Human Papillomavirus HPV16 NC_001526.2
 3154 3155 hg19 chr12 1253362 1253363 p13.33 ERC1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020035 Human Papillomavirus HPV16 NC_001526.2
 2314 2315 hg19 chr12 7801556 7801557 p13.31 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated