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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020036 Human Papillomavirus HPV16 NC_001526.2
 4312 4313 hg19 chr8 138521755 138521756 q24.23 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020037 Human Papillomavirus HPV16 NC_001526.2
 4457 4458 hg19 chr8 138521935 138521936 q24.23 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020038 Human Papillomavirus HPV16 NC_001526.2
 3086 3087 hg19 chr9 5489910 5489911 p24.1 ENSG00000286162 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020039 Human Papillomavirus HPV16 NC_001526.2
 427 428 hg19 chr1 47409983 47409984 p33 LINC01389 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020040 Human Papillomavirus HPV16 NC_001526.2
 3530 3531 hg19 chr1 47421057 47421058 p33 LINC01389 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020041 Human Papillomavirus HPV16 NC_001526.2
 4969 4970 hg19 chr1 47428252 47428253 p33 LINC01389 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020042 Human Papillomavirus HPV16 NC_001526.2
 637 638 hg19 chr1 47434621 47434622 p33 FOXD2-AS1, ENSG00000307814 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020043 Human Papillomavirus HPV16 NC_001526.2
 637 638 hg19 chr1 47434633 47434634 p33 FOXD2-AS1, ENSG00000307814 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020044 Human Papillomavirus HPV16 NC_001526.2
 282 283 hg19 chr1 47435582 47435583 p33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020045 Human Papillomavirus HPV16 NC_001526.2
 7933 7934 hg19 chr1 47435597 47435598 p33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated