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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020046 Human Papillomavirus HPV16 NC_001526.2
 426 427 hg19 chr1 47435817 47435818 p33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020047 Human Papillomavirus HPV16 NC_001526.2
 4272 4273 hg19 chr11 39381251 39381252 p12 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020048 Human Papillomavirus HPV16 NC_001526.2
 4347 4348 hg19 chr11 39382055 39382056 p12 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020049 Human Papillomavirus HPV16 NC_001526.2
 4785 4786 hg19 chr11 39387129 39387130 p12 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020050 Human Papillomavirus HPV16 NC_001526.2
 2904 2905 hg19 chr17 35151124 35151125 q12 UNC45B Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020051 Human Papillomavirus HPV16 NC_001526.2
 2290 2291 hg19 chr19 40752372 40752373 q13.2 SNRPA Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020052 Human Papillomavirus HPV16 NC_001526.2
 9 10 hg19 chr4 1722771 1722772 p16.3 TACC3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020053 Human Papillomavirus HPV16 NC_001526.2
 6536 6537 hg19 chr4 1769434 1769435 p16.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020054 Human Papillomavirus HPV16 NC_001526.2
 7419 7420 hg19 chr1 180849499 180849500 q25.3 XPR1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020055 Human Papillomavirus HPV16 NC_001526.2
 1546 1547 hg19 chr1 180849505 180849506 q25.3 XPR1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated