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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020056 Human Papillomavirus HPV16 NC_001526.2
 7588 7589 hg19 chr1 180856593 180856594 q25.3 XPR1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020057 Human Papillomavirus HPV16 NC_001526.2
 2701 2702 hg19 chr4 1785435 1785436 p16.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020058 Human Papillomavirus HPV16 NC_001526.2
 4378 4379 hg19 chr4 1785450 1785451 p16.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020059 Human Papillomavirus HPV16 NC_001526.2
 1294 1295 hg19 chr6 135234374 135234375 q23.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020060 Human Papillomavirus HPV16 NC_001526.2
 7758 7759 hg19 chr6 135234384 135234385 q23.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020061 Human Papillomavirus HPV33 HQ537707.1
 3929 3930 hg19 chr3 181933982 181933983 q26.33 ENSG00000302744 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020062 Human Papillomavirus HPV18 NC_001357.1
 2757 2758 hg19 chr18 63380906 63380907 q21.33 KDSR-DT Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020063 Human Papillomavirus HPV18 NC_001357.1
 1632 1633 hg19 chr3 196315865 196315866 q29 ENSG00000272741, DYNLT2B Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020064 Human Papillomavirus HPV18 NC_001357.1
 3366 3367 hg19 chr3 196752250 196752251 q29 PAK2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020065 Human Papillomavirus HPV18 NC_001357.1
 3714 3715 hg19 chr6 90073989 90073990 q15 ENSG00000287789, BACH2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated