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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020086 Human Papillomavirus HPV16 NC_001526.2
 4030 4031 hg19 chr13 104182712 104182713 q33.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020087 Human Papillomavirus HPV16 NC_001526.2
 1876 1877 hg19 chr13 114083375 114083376 q34 ENSG00000304656, RASA3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020088 Human Papillomavirus HPV16 NC_001526.2
 1001 1002 hg19 chr13 114083386 114083387 q34 ENSG00000304656, RASA3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020089 Human Papillomavirus HPV16 NC_001526.2
 3905 3906 hg19 chr9 99902569 99902570 q31.1 NAMA Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020090 Human Papillomavirus HPV16 NC_001526.2
 222 223 hg19 chr9 99906614 99906615 q31.1 NAMA Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020091 Human Papillomavirus HPV16 NC_001526.2
 1451 1452 hg19 chr9 99952154 99952155 q31.1 STX17 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020092 Human Papillomavirus HPV16 NC_001526.2
 1811 1812 hg19 chr9 99958096 99958097 q31.1 STX17 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020093 Human Papillomavirus HPV16 NC_001526.2
 6060 6061 hg19 chr9 100321003 100321004 q31.1 TEX10 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020094 Human Papillomavirus HPV16 NC_001526.2
 3487 3488 hg19 chr9 100322681 100322682 q31.1 TEX10 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020095 Human Papillomavirus HPV16 NC_001526.2
 3797 3798 hg19 chr9 100322937 100322938 q31.1 TEX10 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated