Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019556 Human Papillomavirus HPV16 NC_001526.2
 6562 6563 hg19 8 103623542 103623543 q22.3 RIMS2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019557 Human Papillomavirus HPV16 NC_001526.2
 4366 4367 hg19 3 193862549 193862550 q29 ENSG00000304564 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019558 Human Papillomavirus HPV16 NC_001526.2
 3032 3033 hg19 3 193865809 193865810 q29 ENSG00000304564 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019559 Human Papillomavirus HPV16 NC_001526.2
 5480 5481 hg19 1 16134732 16134733 p36.13 EPHA2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019560 Human Papillomavirus HPV16 NC_001526.2
 2633 2634 hg19 1 16254867 16254868 p36.13 FBXO42 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019561 Human Papillomavirus HPV16 NC_001526.2
 6028 6029 hg19 12 86802357 86802358 q21.32 ENSG00000258185, MGAT4C Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019562 Human Papillomavirus HPV16 NC_001526.2
 6347 6348 hg19 12 87101561 87101562 q21.32 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019563 Human Papillomavirus HPV16 NC_001526.2
 817 818 hg19 3 184301063 184301064 q27.1 PSMD2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019564 Human Papillomavirus HPV16 NC_001526.2
 616 617 hg19 3 184301329 184301330 q27.1 PSMD2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019565 Human Papillomavirus HPV16 NC_001526.2
 7876 7877 hg19 3 184315827 184315828 q27.1 EIF4G1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated