Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020106 Human Papillomavirus HPV16 NC_001526.2
 2908 2909 hg19 chr13 73051857 73051858 q22.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020107 Human Papillomavirus HPV16 NC_001526.2
 2637 2638 hg19 chr20 63251865 63251866 q13.33 NKAIN4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020108 Human Papillomavirus HPV16 NC_001526.2
 2165 2166 hg19 chr3 189522116 189522117 q28 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020109 Human Papillomavirus HPV16 NC_001526.2
 2369 2370 hg19 chr3 189522196 189522197 q28 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020110 Human Papillomavirus HPV16 NC_001526.2
 6261 6262 hg19 chr10 7634411 7634412 p14 ITIH5 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020111 Human Papillomavirus HPV16 NC_001526.2
 3857 3858 hg19 chr5 107796628 107796629 q21.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020112 Human Papillomavirus HPV16 NC_001526.2
 5967 5968 hg19 chr7 78154100 78154101 q21.11 MAGI2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020113 Human Papillomavirus HPV16 NC_001526.2
 5571 5572 hg19 chr7 78188339 78188340 q21.11 MAGI2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020114 Human Papillomavirus HPV16 NC_001526.2
 4290 4291 hg19 chr7 78188627 78188628 q21.11 MAGI2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020115 Human Papillomavirus HPV16 NC_001526.2
 4425 4426 hg19 chr7 78188938 78188939 q21.11 MAGI2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated