Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020116 Human Papillomavirus HPV16 NC_001526.2
 3838 3839 hg19 chr8 43967371 43967372 p11.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020117 Human Papillomavirus HPV16 NC_001526.2
 3837 3838 hg19 chr8 43972980 43972981 p11.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020118 Human Papillomavirus HPV16 NC_001526.2
 4068 4069 hg19 chrX 12034242 12034243 p22.2 FRMPD4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020119 Human Papillomavirus HPV16 NC_001526.2
 336 337 hg19 chrX 12035878 12035879 p22.2 FRMPD4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020120 Human Papillomavirus HPV16 NC_001526.2
 7532 7533 hg19 chrX 12255590 12255591 p22.2 FRMPD4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020121 Human Papillomavirus HPV16 NC_001526.2
 6142 6143 hg19 chrX 12261685 12261686 p22.2 FRMPD4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020122 Human Papillomavirus HPV16 NC_001526.2
 7509 7510 hg19 chrX 12261735 12261736 p22.2 FRMPD4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020123 Human Papillomavirus HPV16 NC_001526.2
 7066 7067 hg19 chrX 12261805 12261806 p22.2 FRMPD4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020124 Human Papillomavirus HPV16 NC_001526.2
 7362 7363 hg19 chrX 12261805 12261806 p22.2 FRMPD4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020125 Human Papillomavirus HPV16 NC_001526.2
 444 445 hg19 chrX 46669351 46669352 p11.3 SLC9A7 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated