Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019566 Human Papillomavirus HPV16 NC_001526.2
 5227 5228 hg19 3 184325034 184325035 q27.1 EIF4G1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019567 Human Papillomavirus HPV16 NC_001526.2
 7150 7151 hg19 3 184402575 184402576 q27.1 LINC02054 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019568 Human Papillomavirus HPV16 NC_001526.2
 6288 6289 hg19 3 184440488 184440489 q27.1 LINC02054 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019569 Human Papillomavirus HPV16 NC_001526.2
 743 744 hg19 3 184452187 184452188 q27.1 LINC02054 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019570 Human Papillomavirus HPV16 NC_001526.2
 2601 2602 hg19 3 184456830 184456831 q27.1 LINC02054 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019571 Human Papillomavirus HPV16 NC_001526.2
 3518 3519 hg19 4 176435409 176435410 q34.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019572 Human Papillomavirus HPV16 NC_001526.2
 4306 4307 hg19 4 176457741 176457742 q34.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019573 Human Papillomavirus HPV16 NC_001526.2
 708 709 hg19 4 176457748 176457749 q34.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019574 Human Papillomavirus HPV16 NC_001526.2
 4525 4526 hg19 4 1735567 1735568 p16.3 TACC3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019575 Human Papillomavirus HPV16 NC_001526.2
 1874 1875 hg19 4 1791908 1791909 p16.3 ENSG00000305534 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated