Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020196 Human Papillomavirus HPV16 NC_001526.2
 6676 6677 hg19 chr1 191374615 191374616 q31.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020197 Human Papillomavirus HPV16 NC_001526.2
 6608 6609 hg19 chr1 191391542 191391543 q31.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020198 Human Papillomavirus HPV16 NC_001526.2
 6797 6798 hg19 chr14 45105662 45105663 q21.2 PRPF39 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020199 Human Papillomavirus HPV16 NC_001526.2
 3448 3449 hg19 chr14 45126836 45126837 q21.2 FKBP3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020200 Human Papillomavirus HPV16 NC_001526.2
 1704 1705 hg19 chr15 90501499 90501500 q26.1 IQGAP1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020201 Human Papillomavirus HPV16 NC_001526.2
 1956 1957 hg19 chr15 90501499 90501500 q26.1 IQGAP1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020202 Human Papillomavirus HPV16 NC_001526.2
 7893 7894 hg19 chr15 90501941 90501942 q26.1 IQGAP1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020203 Human Papillomavirus HPV16 NC_001526.2
 62 63 hg19 chr15 90501969 90501970 q26.1 IQGAP1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020204 Human Papillomavirus HPV16 NC_001526.2
 7546 7547 hg19 chr16 7964990 7964991 p13.2 ENSG00000260289, ENSG00000309099 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020205 Human Papillomavirus HPV16 NC_001526.2
 7520 7521 hg19 chr16 7965218 7965219 p13.2 ENSG00000260289, ENSG00000309099 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated