Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020216 Human Papillomavirus HPV16 NC_001526.2
2285 2286 hg19 4 160792744 160792745 q32.1 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020217 Human Papillomavirus HPV16 NC_001526.2
6156 6157 hg19 4 160807942 160807943 q32.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020218 Human Papillomavirus HPV16 NC_001526.2
420 421 hg19 4 160807945 160807946 q32.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020219 Human Papillomavirus HPV16 NC_001526.2
254 255 hg19 4 160807945 160807946 q32.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020220 Human Papillomavirus HPV16 NC_001526.2
2261 2262 hg19 4 160815722 160815723 q32.2 ENSG00000298342 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020221 Human Papillomavirus HPV16 NC_001526.2
5259 5260 hg19 4 160817200 160817201 q32.2 ENSG00000298342 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020222 Human Papillomavirus HPV16 NC_001526.2
1418 1419 hg19 4 160818608 160818609 q32.2 RPS14P7, ENSG00000298342 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020223 Human Papillomavirus HPV16 NC_001526.2
1845 1846 hg19 4 160825490 160825491 q32.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020224 Human Papillomavirus HPV16 NC_001526.2
6159 6160 hg19 4 160834172 160834173 q32.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020225 Human Papillomavirus HPV16 NC_001526.2
874 875 hg19 5 3861839 3861840 p15.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated