Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020226 Human Papillomavirus HPV16 NC_001526.2
 1537 1538 hg19 chr5 3863012 3863013 p15.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020227 Human Papillomavirus HPV16 NC_001526.2
 861 862 hg19 chr5 3875015 3875016 p15.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020228 Human Papillomavirus HPV16 NC_001526.2
 4571 4572 hg19 chr5 3877889 3877890 p15.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020229 Human Papillomavirus HPV16 NC_001526.2
 5392 5393 hg19 chr5 3886367 3886368 p15.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020230 Human Papillomavirus HPV16 NC_001526.2
 3928 3929 hg19 chr5 3887691 3887692 p15.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020231 Human Papillomavirus HPV16 NC_001526.2
 3672 3673 hg19 chr5 3905631 3905632 p15.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020232 Human Papillomavirus HPV16 NC_001526.2
 7789 7790 hg19 chr5 3909046 3909047 p15.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020233 Human Papillomavirus HPV16 NC_001526.2
 865 866 hg19 chr5 3917127 3917128 p15.33 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020234 Human Papillomavirus HPV16 NC_001526.2
 517 518 hg19 chr5 29199309 29199310 p13.3 LINC02109 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020235 Human Papillomavirus HPV16 NC_001526.2
 1663 1664 hg19 chr8 76830710 76830711 q21.13 ZFHX4 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated