Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020236 Human Papillomavirus HPV16 NC_001526.2
 1485 1486 hg19 chr19 9220514 9220515 p13.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020237 Human Papillomavirus HPV16 NC_001526.2
 1485 1486 hg19 chr19 9220515 9220516 p13.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020238 Human Papillomavirus HPV16 NC_001526.2
 1751 1752 hg19 chr19 9220520 9220521 p13.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020239 Human Papillomavirus HPV16 NC_001526.2
 1750 1751 hg19 chr19 9220525 9220526 p13.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020240 Human Papillomavirus HPV16 NC_001526.2
 1570 1571 hg19 chr9 5388153 5388154 p24.1 PLGRKT Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020241 Human Papillomavirus HPV16 NC_001526.2
 1482 1483 hg19 chr9 5388294 5388295 p24.1 PLGRKT Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020242 Human Papillomavirus HPV16 NC_001526.2
 7019 7020 hg19 chr9 5437671 5437672 p24.1 PLGRKT Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020243 Human Papillomavirus HPV16 NC_001526.2
 7848 7849 hg19 chr9 5464244 5464245 p24.1 CD274, ENSG00000286162 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020244 Human Papillomavirus HPV16 NC_001526.2
 7603 7604 hg19 chr9 5464245 5464246 p24.1 CD274, ENSG00000286162 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020245 Human Papillomavirus HPV16 NC_001526.2
 6756 6757 hg19 chr9 5464509 5464510 p24.1 CD274, ENSG00000286162 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated