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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020246 Human Papillomavirus HPV16 NC_001526.2
 6757 6758 hg19 chr9 5464719 5464720 p24.1 CD274, ENSG00000286162 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020247 Human Papillomavirus HPV16 NC_001526.2
 1264 1265 hg19 chr9 5473811 5473812 p24.1 ENSG00000286162 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020248 Human Papillomavirus HPV16 NC_001526.2
 1577 1578 hg19 chr9 5473811 5473812 p24.1 ENSG00000286162 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020249 Human Papillomavirus HPV16 NC_001526.2
 5630 5631 hg19 chr21 38814964 38814965 q22.2 ETS2, ETS2-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020250 Human Papillomavirus HPV16 NC_001526.2
 2619 2620 hg19 chr21 38818701 38818702 q22.2 ETS2, ETS2-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020251 Human Papillomavirus HPV16 NC_001526.2
 1009 1010 hg19 chr21 38837581 38837582 q22.2 ETS2-AS1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020252 Human Papillomavirus HPV16 NC_001526.2
 4615 4616 hg19 chrX 126960040 126960041 q25 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020253 Human Papillomavirus HPV16 NC_001526.2
 3356 3357 hg19 chrX 126960453 126960454 q25 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020254 Human Papillomavirus HPV33 HQ537707.1
 3622 3623 hg19 chr13 42930464 42930465 q14.11 ENSG00000298154, EPSTI1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020255 Human Papillomavirus HPV33 HQ537707.1
 4042 4043 hg19 chr13 42932770 42932771 q14.11 ENSG00000298154, EPSTI1 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated